DsRed-Express2

Noncytotoxic tetrameric variant of DsRed fluorescent protein.

Sequence Author: Clontech (TaKaRa)

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No matches
600 400 200 End (678) NmeAIII (674) BssHII (645) AleI (628) BtgI (626) MscI (547) PflMI * (519) CsiI - SexAI * (518) MflI * - BstYI (479) PspFI (429) BseYI (425) BbsI (421) MmeI (416) PmlI (363) SbfI (341) BseRI (321) AvaI - BsoBI (262) BmrI (183) AhdI (180) BfuAI - PaqCI - BspMI (129) BssSI - BssSαI (73) BsiHKAI (50) ApaLI (46) Start (0) DsRed-Express2 DsRed-Express2 678 bp
End  (678)
0 sites
NmeAIII  (674)
1 site
G C C G A G ( N ) 18-19 N N C G G C T C ( N ) 18-19

Efficient cleavage requires at least two copies of the NmeAIII recognition sequence.
Sticky ends from different NmeAIII sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
BssHII  (645)
1 site
G C G C G C C G C G C G

BssHII is typically used at 50°C, but is 75% active at 37°C.
AleI  (628)
1 site
C A C N N N N G T G G T G N N N N C A C
BtgI  (626)
1 site
C C R Y G G G G Y R C C

Sticky ends from different BtgI sites may not be compatible.
MscI  (547)
1 site
T G G C C A A C C G G T
PflMI  (519)
1 site
C C A N N N N N T G G G G T N N N N N A C C
* Blocked by Dcm methylation.
Sticky ends from different PflMI sites may not be compatible.
CsiI  (518)
1 site
A C C W G G T T G G W C C A

Sticky ends from different CsiI sites may not be compatible.
SexAI  (518)
1 site
A C C W G G T T G G W C C A
* Blocked by Dcm methylation.
Sticky ends from different SexAI sites may not be compatible.
MflI  (479)
1 site
R G A T C Y Y C T A G R
* Blocked by Dam methylation.
BstYI  (479)
1 site
R G A T C Y Y C T A G R
PspFI  (429)
1 site
C C C A G C G G G T C G
BseYI  (425)
1 site
C C C A G C G G G T C G

After cleavage, BseYI can remain bound to DNA and alter its electrophoretic mobility.
BbsI  (421)
1 site
G A A G A C N N C T T C T G N N ( N ) 4

Sticky ends from different BbsI sites may not be compatible.
BbsI gradually loses activity when stored at -20°C.
MmeI  (416)
1 site
T C C R A C ( N ) 18 N N A G G Y T G ( N ) 18

Efficient cleavage requires at least two copies of the MmeI recognition sequence.
Sticky ends from different MmeI sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
PmlI  (363)
1 site
C A C G T G G T G C A C
SbfI  (341)
1 site
C C T G C A G G G G A C G T C C
BseRI  (321)
1 site
G A G G A G ( N ) 8 N N C T C C T C ( N ) 8

Sticky ends from different BseRI sites may not be compatible.
BseRI quickly loses activity at 37°C.
Prolonged incubation with BseRI may lead to degradation of the DNA.
AvaI  (262)
1 site
C Y C G R G G R G C Y C

Sticky ends from different AvaI sites may not be compatible.
BsoBI  (262)
1 site
C Y C G R G G R G C Y C

Sticky ends from different BsoBI sites may not be compatible.
BsoBI is typically used at 37°C, but can be used at temperatures up to 65°C.
BmrI  (183)
1 site
A C T G G G ( N ) 4 N T G A C C C ( N ) 4

The 1-base overhangs produced by BmrI may be hard to ligate.
Sticky ends from different BmrI sites may not be compatible.
Unlike most restriction enzymes, BmrI can cleave DNA in the absence of magnesium.
AhdI  (180)
1 site
G A C N N N N N G T C C T G N N N N N C A G

The 1-base overhangs produced by AhdI may be hard to ligate.
Sticky ends from different AhdI sites may not be compatible.
BfuAI  (129)
1 site
A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4

Efficient cleavage requires at least two copies of the BfuAI recognition sequence.
Sticky ends from different BfuAI sites may not be compatible.
BfuAI is typically used at 50°C, but is 50% active at 37°C.
PaqCI  (129)
1 site
C A C C T G C ( N ) 4 G T G G A C G ( N ) 4 ( N ) 4

Efficient cleavage requires at least two copies of the PaqCI recognition sequence.
Sticky ends from different PaqCI sites may not be compatible.
Cleavage can be improved with PaqCI Activator.
BspMI  (129)
1 site
A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4

Efficient cleavage requires at least two copies of the BspMI recognition sequence.
Sticky ends from different BspMI sites may not be compatible.
BssSI  (73)
1 site
C A C G A G G T G C T C
BssSαI  (73)
1 site
C A C G A G G T G C T C
BsiHKAI  (50)
1 site
G W G C W C C W C G W G

Sticky ends from different BsiHKAI sites may not be compatible.
ApaLI  (46)
1 site
G T G C A C C A C G T G
Start  (0)
0 sites
DsRed-Express2
1 .. 678  =  678 bp
225 amino acids  =  25.7 kDa
Product: noncytotoxic tetrameric variant of DsRed fluorescent protein (Strack et al., 2008)
mammalian codon-optimized
DsRed-Express2
1 .. 678  =  678 bp
225 amino acids  =  25.7 kDa
Product: noncytotoxic tetrameric variant of DsRed fluorescent protein (Strack et al., 2008)
mammalian codon-optimized
ORF:  1 .. 678  =  678 bp
ORF:  225 amino acids  =  25.7 kDa
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