pSF-pA-CMVe-RLuc

Vector encoding the CMV enhancer and Renilla luciferase, for low-background measurements of promoter activity.

Sequence Author: Oxford Genetics

|Download SnapGene Viewer
Explore Over 2.7k Plasmids: Luciferase Vectors | More Plasmid Sets
No matches
PmeI (5140) RsrII (4833) BsrDI (4550) PflFI - Tth111I (4435) PmeI (4092) PpuMI - SanDI (4026) AscI (3935) FseI (3789) NaeI (3787) NgoMIV (3785) SwaI (3683) BspHI (3514) AlwNI (3210) BssSI (2967) SwaI (2790) PacI (2664) BstEII (2638) AsiSI - PvuI (5) BglII (232) AseI (244) CMV enhancer SnaBI (577) NruI (710) PshAI (716) poly(A) signal ScaI (789) AarI (854) SalI (885) AccI (886) SpeI (893) TspMI - XmaI (901) SmaI (903) PspOMI (909) ApaI (913) BstBI (918) BglII (926) EagI - NotI (968) HindIII (979) Eco53kI (989) SacI (991) EcoRI (995) Acc65I (1007) KpnI (1011) BstAPI (1205) Bpu10I (1665) BseRI - BsgI (1954) stop codons BspDI - ClaI (1991) BamHI (2000) StuI (2010) NheI (2016) BmtI (2020) stop codons HpaI (2186) MfeI (2195) PstI - SbfI (2532) 3' β-globin insulator pSF-pA-CMVe-RLuc 5259 bp
PmeI  (5140)
2 sites
G T T T A A A C C A A A T T T G
RsrII  (4833)
1 site
C G G W C C G G C C W G G C

Efficient cleavage requires at least two copies of the RsrII recognition sequence.
Sticky ends from different RsrII sites may not be compatible.
For full activity, add fresh DTT.
BsrDI  (4550)
1 site
G C A A T G N N C G T T A C

Sticky ends from different BsrDI sites may not be compatible.
PflFI  (4435)
1 site
G A C N N N G T C C T G N N N C A G

The 1-base overhangs produced by PflFI may be hard to ligate.
Sticky ends from different PflFI sites may not be compatible.
Tth111I  (4435)
1 site
G A C N N N G T C C T G N N N C A G

The 1-base overhangs produced by Tth111I may be hard to ligate.
Sticky ends from different Tth111I sites may not be compatible.
PmeI  (4092)
2 sites
G T T T A A A C C A A A T T T G
PpuMI  (4026)
1 site
R G G W C C Y Y C C W G G R

Sticky ends from different PpuMI sites may not be compatible.
SanDI  (4026)
1 site
G G G W C C C C C C W G G G

Sticky ends from different SanDI sites may not be compatible.
AscI  (3935)
1 site
G G C G C G C C C C G C G C G G
FseI  (3789)
1 site
G G C C G G C C C C G G C C G G

FseI gradually loses activity when stored at -20°C.
NaeI  (3787)
1 site
G C C G G C C G G C C G

Efficient cleavage requires at least two copies of the NaeI recognition sequence.
NgoMIV  (3785)
1 site
G C C G G C C G G C C G

Efficient cleavage requires at least two copies of the NgoMIV recognition sequence.
SwaI  (3683)
2 sites
A T T T A A A T T A A A T T T A

SwaI is typically used at 25°C, but is 50% active at 37°C.
BspHI  (3514)
1 site
T C A T G A A G T A C T
AlwNI  (3210)
1 site
C A G N N N C T G G T C N N N G A C

Sticky ends from different AlwNI sites may not be compatible.
BssSI  (2967)
1 site
C A C G A G G T G C T C
SwaI  (2790)
2 sites
A T T T A A A T T A A A T T T A

SwaI is typically used at 25°C, but is 50% active at 37°C.
PacI  (2664)
1 site
T T A A T T A A A A T T A A T T
BstEII  (2638)
1 site
G G T N A C C C C A N T G G

Sticky ends from different BstEII sites may not be compatible.
BstEII is typically used at 60°C, but is 50% active at 37°C.
AsiSI  (5)
1 site
G C G A T C G C C G C T A G C G
PvuI  (5)
1 site
C G A T C G G C T A G C
BglII  (232)
2 sites
A G A T C T T C T A G A
AseI  (244)
1 site
A T T A A T T A A T T A
SnaBI  (577)
1 site
T A C G T A A T G C A T
NruI  (710)
1 site
T C G C G A A G C G C T
PshAI  (716)
1 site
G A C N N N N G T C C T G N N N N C A G

PshAI quickly loses activity at 37°C, but can be used at 25°C for long incubations.
ScaI  (789)
1 site
A G T A C T T C A T G A
AarI  (854)
1 site
C A C C T G C ( N ) 4 G T G G A C G ( N ) 4 ( N ) 4

Cleavage may be enhanced when more than one copy of the AarI recognition sequence is present.
Sticky ends from different AarI sites may not be compatible.
After cleavage, AarI can remain bound to DNA and alter its electrophoretic mobility.
SalI  (885)
1 site
G T C G A C C A G C T G
AccI  (886)
1 site
G T M K A C C A K M T G

Efficient cleavage with AccI requires ≥13 bp on each side of the recognition sequence.
Sticky ends from different AccI sites may not be compatible.
SpeI  (893)
1 site
A C T A G T T G A T C A
TspMI  (901)
1 site
C C C G G G G G G C C C
XmaI  (901)
1 site
C C C G G G G G G C C C

Cleavage may be enhanced when more than one copy of the XmaI recognition sequence is present.
SmaI  (903)
1 site
C C C G G G G G G C C C

SmaI can be used at 37°C for brief incubations.
PspOMI  (909)
1 site
G G G C C C C C C G G G
ApaI  (913)
1 site
G G G C C C C C C G G G

ApaI can be used between 25°C and 37°C.
BstBI  (918)
1 site
T T C G A A A A G C T T
BglII  (926)
2 sites
A G A T C T T C T A G A
EagI  (968)
1 site
C G G C C G G C C G G C
NotI  (968)
1 site
G C G G C C G C C G C C G G C G
HindIII  (979)
1 site
A A G C T T T T C G A A
Eco53kI  (989)
1 site
G A G C T C C T C G A G
SacI  (991)
1 site
G A G C T C C T C G A G
EcoRI  (995)
1 site
G A A T T C C T T A A G
Acc65I  (1007)
1 site
G G T A C C C C A T G G
KpnI  (1011)
1 site
G G T A C C C C A T G G
BstAPI  (1205)
1 site
G C A N N N N N T G C C G T N N N N N A C G

Sticky ends from different BstAPI sites may not be compatible.
Bpu10I  (1665)
1 site
C C T N A G C G G A N T C G

Cleavage may be enhanced when more than one copy of the Bpu10I recognition sequence is present.
This recognition sequence is asymmetric, so ligating sticky ends generated by Bpu10I will not always regenerate a Bpu10I site.
Sticky ends from different Bpu10I sites may not be compatible.
BseRI  (1954)
1 site
G A G G A G ( N ) 8 N N C T C C T C ( N ) 8

Sticky ends from different BseRI sites may not be compatible.
BseRI quickly loses activity at 37°C.
Prolonged incubation with BseRI may lead to degradation of the DNA.
BsgI  (1954)
1 site
G T G C A G ( N ) 14 N N C A C G T C ( N ) 14

Efficient cleavage requires at least two copies of the BsgI recognition sequence.
Sticky ends from different BsgI sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
BspDI  (1991)
1 site
A T C G A T T A G C T A
ClaI  (1991)
1 site
A T C G A T T A G C T A
BamHI  (2000)
1 site
G G A T C C C C T A G G

After cleavage, BamHI-HF® (but not the original BamHI) can remain bound to DNA and alter its electrophoretic mobility.
StuI  (2010)
1 site
A G G C C T T C C G G A
NheI  (2016)
1 site
G C T A G C C G A T C G
BmtI  (2020)
1 site
G C T A G C C G A T C G
HpaI  (2186)
1 site
G T T A A C C A A T T G
MfeI  (2195)
1 site
C A A T T G G T T A A C
PstI  (2532)
1 site
C T G C A G G A C G T C
SbfI  (2532)
1 site
C C T G C A G G G G A C G T C C
RLuc
1017 .. 1955  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
RLuc
1017 .. 1955  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
NeoR/KanR
4189 .. 4983  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
NeoR/KanR
4189 .. 4983  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
ori
2855 .. 3443  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
2855 .. 3443  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
CMV enhancer
298 .. 601  =  304 bp
human cytomegalovirus immediate early enhancer
CMV enhancer
298 .. 601  =  304 bp
human cytomegalovirus immediate early enhancer
rrnG terminator
2377 .. 2513  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
2377 .. 2513  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
4996 .. 5132  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
4996 .. 5132  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
SV40 poly(A) signal
2065 .. 2186  =  122 bp
SV40 polyadenylation signal
SV40 poly(A) signal
2065 .. 2186  =  122 bp
SV40 polyadenylation signal
pause site
793 .. 884  =  92 bp
RNA polymerase II transcriptional pause signal from the human α2 globin gene
pause site
793 .. 884  =  92 bp
RNA polymerase II transcriptional pause signal from the human α2 globin gene
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
2558 .. 2629  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
2558 .. 2629  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
poly(A) signal
731 .. 779  =  49 bp
synthetic polyadenylation signal
poly(A) signal
731 .. 779  =  49 bp
synthetic polyadenylation signal
T7 terminator
2301 .. 2347  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
T7 terminator
2301 .. 2347  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
MCS
885 .. 922  =  38 bp
multiple cloning site
MCS
885 .. 922  =  38 bp
multiple cloning site
stop codons
1975 .. 1985  =  11 bp
stop codons in all three reading frames
stop codons
1975 .. 1985  =  11 bp
stop codons in all three reading frames
stop codons
2023 .. 2033  =  11 bp
stop codons in all three reading frames
stop codons
2023 .. 2033  =  11 bp
stop codons in all three reading frames
RBS
1003 .. 1008  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
1003 .. 1008  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
4176 .. 4181  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
4176 .. 4181  =  6 bp
Shine-Dalgarno ribosome binding site
Kozak sequence
1013 .. 1019  =  7 bp
Kozak sequence
1013 .. 1019  =  7 bp
ORF:  4189 .. 4983  =  795 bp
ORF:  264 amino acids  =  29.0 kDa
ORF:  2402 .. 2833  =  432 bp
ORF:  143 amino acids  =  16.3 kDa
ORF:  4361 .. 4747  =  387 bp
ORF:  128 amino acids  =  14.7 kDa
ORF:  5021 .. 196  =  435 bp
ORF:  144 amino acids  =  16.1 kDa
ORF:  861 .. 1955  =  1095 bp
ORF:  364 amino acids  =  41.8 kDa
ORF:  999 .. 1871  =  873 bp
ORF:  290 amino acids  =  34.7 kDa
Click here to try SnapGene

Download pSF-pA-CMVe-RLuc.dna file

SnapGene

SnapGene is the easiest way to plan, visualize and document your everyday molecular biology procedures

  • Fast accurate construct design for all major molecular cloning techniques
  • Validate sequenced constructs using powerful alignment tools
  • Customize plasmid maps with flexible annotation and visualization controls
  • Automatically generate a rich graphical history of every edit and procedure

SnapGene Viewer

SnapGene Viewer is free software that allows molecular biologists to create, browse, and share richly annotated sequence files.

  • Gain unparalleled visibility of your plasmids, DNA and protein sequences
  • Annotate features on your plasmids using the curated feature database
  • Store, search, and share your sequences, files and maps

Individual Sequences & Maps

The maps, notes, and annotations in the zip file on this page are copyrighted material. This material may be used without restriction by academic, nonprofit, and governmental entities, except that the source must be cited as ’’www.snapgene.com/resources’’. Commercial entities must contact GSL Biotech LLC for permission and terms of use.

Discover the most user-friendly molecular biology experience.