Home » Features » Convert File Formats » Alignment Formats

SnapGene can both read and write a variety of multiple alignment formats:

  • Clustal
  • GDE
  • MSF
  • PIR
  • Selex
  • Stockholm

For example, shown below is a Selex file that was generated by the Pfam database and then opened in SnapGene.

Try it yourself. Download the free SnapGene Viewer:

If you wish to request support for another alignment file format, or if you have trouble opening an alignment file with SnapGene or SnapGene Viewer, please send us a message and attach a sample file.