SnapGene and SnapGene Viewer can read project files created by Genome Compiler. For construction project files, the ancestors and cloning/assembly procedures are captured in History view. Shown below is an example of a Genome Compiler .gcproj file viewed with the original program and with SnapGene.
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If you have trouble opening a Genome Compiler file with SnapGene or SnapGene Viewer, please send us a message and attach the file.