pAcHLT B

Baculovirus transfer vector for expressing proteins with an N-terminal 6xHis-PKA-thrombin cassette. For other reading frames, use pAcHLT A or pAcHLT C.

Sequence Author: BD Biosciences

|Download SnapGene Viewer
Explore Over 2.7k Plasmids: Insect Cell Vectors | More Plasmid Sets
No matches
BspQI - SapI (7867) PspFI (7450) BseYI (7446) AlwNI (7341) BpmI (6793) NmeAIII (6715) ScaI (6381) EcoO109I (5882) PfoI (5823) DraIII (5466) MscI (4156) SphI (234) BclI * (331) BstXI (1255) BbvCI - Bpu10I (1504) baculovirus recombination region (lef2/ORF603) EcoRV (2099) PKA site thrombin site PaeR7I - PspXI - XhoI (2321) EcoRI (2327) StuI (2335) BtgI - NcoI - StyI (2339) Eco53kI (2347) SacI (2349) NotI (2352) PstI - SbfI (2363) Acc65I (2365) KpnI (2369) TspMI - XmaI (2371) SmaI (2373) BglII (2377) SnaBI (2566) SwaI (2656) AgeI (3414) SgrAI (3654) SgrDI (3933) FspAI (4086) pAcHLT B 8110 bp
BspQI  (7867)
1 site
G C T C T T C N C G A G A A G N N N N

Sticky ends from different BspQI sites may not be compatible.
SapI  (7867)
1 site
G C T C T T C N C G A G A A G N N N N

Sticky ends from different SapI sites may not be compatible.
SapI gradually settles in solution, so a tube of SapI should be mixed before removing an aliquot.
PspFI  (7450)
1 site
C C C A G C G G G T C G
BseYI  (7446)
1 site
C C C A G C G G G T C G

After cleavage, BseYI can remain bound to DNA and alter its electrophoretic mobility.
AlwNI  (7341)
1 site
C A G N N N C T G G T C N N N G A C

Sticky ends from different AlwNI sites may not be compatible.
BpmI  (6793)
1 site
C T G G A G ( N ) 14 N N G A C C T C ( N ) 14

Efficient cleavage requires at least two copies of the BpmI recognition sequence.
Sticky ends from different BpmI sites may not be compatible.
After cleavage, BpmI can remain bound to DNA and alter its electrophoretic mobility.
BpmI quickly loses activity at 37°C.
NmeAIII  (6715)
1 site
G C C G A G ( N ) 18-19 N N C G G C T C ( N ) 18-19

Efficient cleavage requires at least two copies of the NmeAIII recognition sequence.
Sticky ends from different NmeAIII sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
ScaI  (6381)
1 site
A G T A C T T C A T G A
EcoO109I  (5882)
1 site
R G G N C C Y Y C C N G G R

Sticky ends from different EcoO109I sites may not be compatible.
PfoI  (5823)
1 site
T C C N G G A A G G N C C T

Sticky ends from different PfoI sites may not be compatible.
DraIII  (5466)
1 site
C A C N N N G T G G T G N N N C A C

Sticky ends from different DraIII sites may not be compatible.
MscI  (4156)
1 site
T G G C C A A C C G G T
SphI  (234)
1 site
G C A T G C C G T A C G
BclI  (331)
1 site
T G A T C A A C T A G T
* Blocked by Dam methylation.
BclI is typically used at 50-55°C, but is 50% active at 37°C.
BstXI  (1255)
1 site
C C A N N N N N N T G G G G T N N N N N N A C C

Sticky ends from different BstXI sites may not be compatible.
BbvCI  (1504)
1 site
C C T C A G C G G A G T C G
Bpu10I  (1504)
1 site
C C T N A G C G G A N T C G

Cleavage may be enhanced when more than one copy of the Bpu10I recognition sequence is present.
This recognition sequence is asymmetric, so ligating sticky ends generated by Bpu10I will not always regenerate a Bpu10I site.
Sticky ends from different Bpu10I sites may not be compatible.
EcoRV  (2099)
1 site
G A T A T C C T A T A G

EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
PaeR7I  (2321)
1 site
C T C G A G G A G C T C

PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (2321)
1 site
V C T C G A G B B G A G C T C V
XhoI  (2321)
1 site
C T C G A G G A G C T C
EcoRI  (2327)
1 site
G A A T T C C T T A A G
StuI  (2335)
1 site
A G G C C T T C C G G A
BtgI  (2339)
1 site
C C R Y G G G G Y R C C

Sticky ends from different BtgI sites may not be compatible.
NcoI  (2339)
1 site
C C A T G G G G T A C C
StyI  (2339)
1 site
C C W W G G G G W W C C

Sticky ends from different StyI sites may not be compatible.
Eco53kI  (2347)
1 site
G A G C T C C T C G A G
SacI  (2349)
1 site
G A G C T C C T C G A G
NotI  (2352)
1 site
G C G G C C G C C G C C G G C G
PstI  (2363)
1 site
C T G C A G G A C G T C
SbfI  (2363)
1 site
C C T G C A G G G G A C G T C C
Acc65I  (2365)
1 site
G G T A C C C C A T G G
KpnI  (2369)
1 site
G G T A C C C C A T G G
TspMI  (2371)
1 site
C C C G G G G G G C C C
XmaI  (2371)
1 site
C C C G G G G G G C C C

Cleavage may be enhanced when more than one copy of the XmaI recognition sequence is present.
SmaI  (2373)
1 site
C C C G G G G G G C C C

SmaI can be used at 37°C for brief incubations.
BglII  (2377)
1 site
A G A T C T T C T A G A
SnaBI  (2566)
1 site
T A C G T A A T G C A T
SwaI  (2656)
1 site
A T T T A A A T T A A A T T T A

SwaI is typically used at 25°C, but is 50% active at 37°C.
AgeI  (3414)
1 site
A C C G G T T G G C C A
SgrAI  (3654)
1 site
C R C C G G Y G G Y G G C C R C

Efficient cleavage requires at least two copies of the SgrAI recognition sequence.
SgrDI  (3933)
1 site
C G T C G A C G G C A G C T G C
FspAI  (4086)
1 site
R T G C G C A Y Y A C G C G T R
baculovirus recombination region (ORF1629)
2402 .. 3860  =  1459 bp
contains part of ORF1629
baculovirus recombination region (ORF1629)
2402 .. 3860  =  1459 bp
contains part of ORF1629
AmpR
6075 .. 6935  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 1:  signal sequence  
   6075 .. 6143  =  69 bp
   23 amino acids  =  2.6 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
6075 .. 6935  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 2:  
   6144 .. 6935  =  792 bp
   263 amino acids  =  28.9 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
6075 .. 6935  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
baculovirus recombination region (lef2/ORF603)
1269 .. 2096  =  828 bp
contains ORF603 and part of lef2
baculovirus recombination region (lef2/ORF603)
1269 .. 2096  =  828 bp
contains ORF603 and part of lef2
ori
7106 .. 7694  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
7106 .. 7694  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
f1 ori
5233 .. 5688  =  456 bp
f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis
f1 ori
5233 .. 5688  =  456 bp
f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis
AmpR promoter
5970 .. 6074  =  105 bp
AmpR promoter
5970 .. 6074  =  105 bp
polyhedrin promoter
2100 .. 2191  =  92 bp
promoter for the baculovirus polyhedrin gene
polyhedrin promoter
2100 .. 2191  =  92 bp
promoter for the baculovirus polyhedrin gene
6xHis
2230 .. 2247  =  18 bp
6 amino acids  =  840.9 Da
Product: 6xHis affinity tag
6xHis
2230 .. 2247  =  18 bp
6 amino acids  =  840.9 Da
Product: 6xHis affinity tag
PKA site
2254 .. 2271  =  18 bp
6 amino acids  =  658.8 Da
Product: recognition site for phosphorylation by protein kinase A
PKA site
2254 .. 2271  =  18 bp
6 amino acids  =  658.8 Da
Product: recognition site for phosphorylation by protein kinase A
thrombin site
2281 .. 2298  =  18 bp
6 amino acids  =  627.7 Da
Product: thrombin recognition and cleavage site
thrombin site
2281 .. 2298  =  18 bp
6 amino acids  =  627.7 Da
Product: thrombin recognition and cleavage site
MCS
2321 .. 2382  =  62 bp
multiple cloning site
MCS
2321 .. 2382  =  62 bp
multiple cloning site
ORF1629
2519 .. 3860  =  1342 bp
446 amino acids  =  49.2 kDa
Product: baculovirus capsid-associated protein
required for viral replication
ORF1629
2519 .. 3860  =  1342 bp
446 amino acids  =  49.2 kDa
Product: baculovirus capsid-associated protein
required for viral replication
ORF603
1431 .. 2036  =  606 bp
201 amino acids  =  23.6 kDa
Product: baculovirus ORF603 protein
ORF603
1431 .. 2036  =  606 bp
201 amino acids  =  23.6 kDa
Product: baculovirus ORF603 protein
lef2
1269 .. 1393  =  125 bp
40 amino acids  =  4.5 kDa
Product: baculovirus late expression factor 2
lef2
1269 .. 1393  =  125 bp
40 amino acids  =  4.5 kDa
Product: baculovirus late expression factor 2
ORF:  451 .. 780  =  330 bp
ORF:  109 amino acids  =  12.4 kDa
ORF:  2206 .. 2442  =  237 bp
ORF:  78 amino acids  =  8.5 kDa
ORF:  4153 .. 4743  =  591 bp
ORF:  196 amino acids  =  22.9 kDa
ORF:  4951 .. 5256  =  306 bp
ORF:  101 amino acids  =  11.7 kDa
ORF:  8092 .. 248  =  267 bp
ORF:  88 amino acids  =  10.0 kDa
ORF:  761 .. 1393  =  633 bp
ORF:  210 amino acids  =  23.9 kDa
ORF:  6075 .. 6935  =  861 bp
ORF:  286 amino acids  =  31.6 kDa
ORF:  1475 .. 1705  =  231 bp
ORF:  76 amino acids  =  9.3 kDa
ORF:  2519 .. 3772  =  1254 bp
ORF:  417 amino acids  =  46.0 kDa
ORF:  6539 .. 6805  =  267 bp
ORF:  88 amino acids  =  9.2 kDa
ORF:  8026 .. 422  =  507 bp
ORF:  168 amino acids  =  19.7 kDa
ORF:  1431 .. 2036  =  606 bp
ORF:  201 amino acids  =  23.6 kDa
ORF:  3816 .. 4154  =  339 bp
ORF:  112 amino acids  =  13.3 kDa
ORF:  4896 .. 5213  =  318 bp
ORF:  105 amino acids  =  12.3 kDa
Click here to try SnapGene

Download pAcHLT B.dna file

SnapGene

SnapGene is the easiest way to plan, visualize and document your everyday molecular biology procedures

  • Fast accurate construct design for all major molecular cloning techniques
  • Validate sequenced constructs using powerful alignment tools
  • Customize plasmid maps with flexible annotation and visualization controls
  • Automatically generate a rich graphical history of every edit and procedure

SnapGene Viewer

SnapGene Viewer is free software that allows molecular biologists to create, browse, and share richly annotated sequence files.

  • Gain unparalleled visibility of your plasmids, DNA and protein sequences
  • Annotate features on your plasmids using the curated feature database
  • Store, search, and share your sequences, files and maps

Individual Sequences & Maps

The maps, notes, and annotations in the zip file on this page are copyrighted material. This material may be used without restriction by academic, nonprofit, and governmental entities, except that the source must be cited as ’’www.snapgene.com/resources’’. Commercial entities must contact GSL Biotech LLC for permission and terms of use.

Discover the most user-friendly molecular biology experience.