pSF-CMV-Ub-RLuc AscI

Mammalian vector for co-expressing a gene together with Renilla luciferase expressed from the ubiquitin C promoter.

Sequence Author: Oxford Genetics

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HomePlasmidsLuciferase VectorspSF-CMV-Ub-RLuc AscI
PmeI (6367) RsrII (6060) BsrDI (5777) PflFI - Tth111I (5662) PmeI (5319) AscI (5162) AanI - AanI (4434) BstAPI (4330) EcoNI (3869) AvrII (3865) AarI (3819) AanI - AanI (3792) BpmI (3688) BbsI (3509) BsaI (3394) DraIII (3325) AfeI (2984) AsiSI - PvuI (5) BglII (232) SnaBI (566) CMV promoter BglII (816) EagI - NotI (858) HindIII (869) Eco53kI (879) SacI (881) EcoRI (885) MCS KpnI (901) NcoI (905) KpnI (915) EcoRV (921) AbsI - PaeR7I - PspXI - XhoI (928) XbaI (937) BseRI - BsgI (940) stop codons BspDI - ClaI (977) BamHI (986) StuI (996) NheI (1002) BmtI (1006) stop codons SV40 poly(A) signal AanI - AanI (1152) HpaI (1172) MfeI (1181) PstI - SbfI (1518) 3' β-globin insulator BstEII (1624) PacI (1650) SwaI (1776) AlwNI (2196) BspHI (2500) SwaI (2669) NgoMIV (2771) NaeI (2773) FseI (2775) AscI (2921) SacII (2959) pSF-CMV-Ub-RLuc AscI 6486 bp
PmeI  (6367)
2 sites		 G T T T A A A C C A A A T T T G
RsrII  (6060)
1 site		 C G G W C C G G C C W G G C
Efficient cleavage requires at least two copies of the RsrII recognition sequence.
Sticky ends from different RsrII sites may not be compatible.
For full activity, add fresh DTT.
BsrDI  (5777)
1 site		 G C A A T G N N C G T T A C
Sticky ends from different BsrDI sites may not be compatible.
PflFI  (5662)
1 site		 G A C N N N G T C C T G N N N C A G
The 1-base overhangs produced by PflFI may be hard to ligate.
Sticky ends from different PflFI sites may not be compatible.
Tth111I  (5662)
1 site		 G A C N N N G T C C T G N N N C A G
The 1-base overhangs produced by Tth111I may be hard to ligate.
Sticky ends from different Tth111I sites may not be compatible.
PmeI  (5319)
2 sites		 G T T T A A A C C A A A T T T G
AscI  (5162)
2 sites		 G G C G C G C C C C G C G C G G
AanI  (4434)
3 sites		 T T A T A A A A T A T T
AanI  (4434)
3 sites		 T T A T A A A A T A T T
BstAPI  (4330)
1 site		 G C A N N N N N T G C C G T N N N N N A C G
Sticky ends from different BstAPI sites may not be compatible.
EcoNI  (3869)
1 site		 C C T N N N N N A G G G G A N N N N N T C C
The 1-base overhangs produced by EcoNI may be hard to ligate.
Sticky ends from different EcoNI sites may not be compatible.
AvrII  (3865)
1 site		 C C T A G G G G A T C C
AarI  (3819)
1 site		 C A C C T G C ( N ) 4 G T G G A C G ( N ) 4 ( N ) 4
Cleavage may be enhanced when more than one copy of the AarI recognition sequence is present.
Sticky ends from different AarI sites may not be compatible.
After cleavage, AarI can remain bound to DNA and alter its electrophoretic mobility.
AanI  (3792)
3 sites		 T T A T A A A A T A T T
AanI  (3792)
3 sites		 T T A T A A A A T A T T
BpmI  (3688)
1 site		 C T G G A G ( N ) 14 N N G A C C T C ( N ) 14
Efficient cleavage requires at least two copies of the BpmI recognition sequence.
Sticky ends from different BpmI sites may not be compatible.
After cleavage, BpmI can remain bound to DNA and alter its electrophoretic mobility.
BpmI quickly loses activity at 37°C.
BbsI  (3509)
1 site		 G A A G A C N N C T T C T G N N ( N ) 4
Sticky ends from different BbsI sites may not be compatible.
BbsI gradually loses activity when stored at -20°C.
BsaI  (3394)
1 site		 G G T C T C N C C A G A G N ( N ) 4
Sticky ends from different BsaI sites may not be compatible.
BsaI can be used between 37°C and 50°C.
DraIII  (3325)
1 site		 C A C N N N G T G G T G N N N C A C
Sticky ends from different DraIII sites may not be compatible.
AfeI  (2984)
1 site		 A G C G C T T C G C G A
AsiSI  (5)
1 site		 G C G A T C G C C G C T A G C G
PvuI  (5)
1 site		 C G A T C G G C T A G C
BglII  (232)
2 sites		 A G A T C T T C T A G A
SnaBI  (566)
1 site		 T A C G T A A T G C A T
BglII  (816)
2 sites		 A G A T C T T C T A G A
EagI  (858)
1 site		 C G G C C G G C C G G C
NotI  (858)
1 site		 G C G G C C G C C G C C G G C G
HindIII  (869)
1 site		 A A G C T T T T C G A A
Eco53kI  (879)
1 site		 G A G C T C C T C G A G
SacI  (881)
1 site		 G A G C T C C T C G A G
EcoRI  (885)
1 site		 G A A T T C C T T A A G
KpnI  (901)
2 sites		 G G T A C C C C A T G G
NcoI  (905)
1 site		 C C A T G G G G T A C C
KpnI  (915)
2 sites		 G G T A C C C C A T G G
EcoRV  (921)
1 site		 G A T A T C C T A T A G
EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
AbsI  (928)
1 site		 C C T C G A G G G G A G C T C C
PaeR7I  (928)
1 site		 C T C G A G G A G C T C
PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (928)
1 site		 V C T C G A G B B G A G C T C V
XhoI  (928)
1 site		 C T C G A G G A G C T C
XbaI  (937)
1 site		 T C T A G A A G A T C T
BseRI  (940)
1 site		 G A G G A G ( N ) 8 N N C T C C T C ( N ) 8
Sticky ends from different BseRI sites may not be compatible.
BseRI quickly loses activity at 37°C.
Prolonged incubation with BseRI may lead to degradation of the DNA.
BsgI  (940)
1 site		 G T G C A G ( N ) 14 N N C A C G T C ( N ) 14
Efficient cleavage requires at least two copies of the BsgI recognition sequence.
Sticky ends from different BsgI sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
BspDI  (977)
1 site		 A T C G A T T A G C T A
ClaI  (977)
1 site		 A T C G A T T A G C T A
BamHI  (986)
1 site		 G G A T C C C C T A G G
After cleavage, BamHI-HF® (but not the original BamHI) can remain bound to DNA and alter its electrophoretic mobility.
StuI  (996)
1 site		 A G G C C T T C C G G A
NheI  (1002)
1 site		 G C T A G C C G A T C G
BmtI  (1006)
1 site		 G C T A G C C G A T C G
AanI  (1152)
3 sites		 T T A T A A A A T A T T
AanI  (1152)
3 sites		 T T A T A A A A T A T T
HpaI  (1172)
1 site		 G T T A A C C A A T T G
MfeI  (1181)
1 site		 C A A T T G G T T A A C
PstI  (1518)
1 site		 C T G C A G G A C G T C
SbfI  (1518)
1 site		 C C T G C A G G G G A C G T C C
BstEII  (1624)
1 site		 G G T N A C C C C A N T G G
Sticky ends from different BstEII sites may not be compatible.
BstEII is typically used at 60°C, but is 50% active at 37°C.
PacI  (1650)
1 site		 T T A A T T A A A A T T A A T T
SwaI  (1776)
2 sites		 A T T T A A A T T A A A T T T A
SwaI is typically used at 25°C, but is 50% active at 37°C.
AlwNI  (2196)
1 site		 C A G N N N C T G G T C N N N G A C
Sticky ends from different AlwNI sites may not be compatible.
BspHI  (2500)
1 site		 T C A T G A A G T A C T
SwaI  (2669)
2 sites		 A T T T A A A T T A A A T T T A
SwaI is typically used at 25°C, but is 50% active at 37°C.
NgoMIV  (2771)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NgoMIV recognition sequence.
NaeI  (2773)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NaeI recognition sequence.
FseI  (2775)
1 site		 G G C C G G C C C C G G C C G G
FseI gradually loses activity when stored at -20°C.
AscI  (2921)
2 sites		 G G C G C G C C C C G C G C G G
SacII  (2959)
1 site		 C C G C G G G G C G C C
Efficient cleavage requires at least two copies of the SacII recognition sequence.
UbC promoter
2929 .. 4138  =  1210 bp
human ubiquitin C promoter
UbC promoter
2929 .. 4138  =  1210 bp
human ubiquitin C promoter
RLuc
4142 .. 5080  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
RLuc
4142 .. 5080  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
NeoR/KanR
5416 .. 6210  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
NeoR/KanR
5416 .. 6210  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
ori
1841 .. 2429  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
1841 .. 2429  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
CMV enhancer
287 .. 590  =  304 bp
human cytomegalovirus immediate early enhancer
CMV enhancer
287 .. 590  =  304 bp
human cytomegalovirus immediate early enhancer
CMV promoter
591 .. 794  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
CMV promoter
591 .. 794  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
rrnG terminator
1363 .. 1499  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
1363 .. 1499  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
6223 .. 6359  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
6223 .. 6359  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
SV40 poly(A) signal
1051 .. 1172  =  122 bp
SV40 polyadenylation signal
SV40 poly(A) signal
1051 .. 1172  =  122 bp
SV40 polyadenylation signal
MCS
857 .. 942  =  86 bp
multiple cloning site
MCS
857 .. 942  =  86 bp
multiple cloning site
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
1544 .. 1615  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
1544 .. 1615  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
poly(A) signal
5102 .. 5150  =  49 bp
synthetic polyadenylation signal
poly(A) signal
5102 .. 5150  =  49 bp
synthetic polyadenylation signal
T7 terminator
1287 .. 1333  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
T7 terminator
1287 .. 1333  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
stop codons
961 .. 971  =  11 bp
stop codons in all three reading frames
stop codons
961 .. 971  =  11 bp
stop codons in all three reading frames
stop codons
1009 .. 1019  =  11 bp
stop codons in all three reading frames
stop codons
1009 .. 1019  =  11 bp
stop codons in all three reading frames
RBS
5403 .. 5408  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
5403 .. 5408  =  6 bp
Shine-Dalgarno ribosome binding site
ORF:  5416 .. 6210  =  795 bp
ORF:  264 amino acids  =  29.0 kDa
ORF:  1388 .. 1819  =  432 bp
ORF:  143 amino acids  =  16.3 kDa
ORF:  3593 .. 3832  =  240 bp
ORF:  79 amino acids  =  8.5 kDa
ORF:  4142 .. 5080  =  939 bp
ORF:  312 amino acids  =  36.1 kDa
ORF:  5588 .. 5974  =  387 bp
ORF:  128 amino acids  =  14.7 kDa
ORF:  6248 .. 196  =  435 bp
ORF:  144 amino acids  =  16.1 kDa
ORF:  3126 .. 3635  =  510 bp
ORF:  169 amino acids  =  17.9 kDa
ORF:  3260 .. 3553  =  294 bp
ORF:  97 amino acids  =  11.3 kDa
ORF:  4133 .. 4996  =  864 bp
ORF:  287 amino acids  =  34.4 kDa
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Individual Sequences & Maps

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phRG-B
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pGL4.31[luc2P GAL4UAS Hygro]
phRL-null
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phRL-SV40
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pCMV-CLuc 2
pGL4.33[luc2P SRE Hygro]
phRL-TK
pSF-CMV-RLuc
pCMV-Cypridina Luc
pGL4.34[luc2P SRF-RE Hygro]
phRL-TK(Int-)
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pCMV-Gaussia Luc
pGL4.35[luc2P 9XGAL4UAS Hygro]
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pGL4.37[luc2P ARE Hygro]
pLVX-MetLuc Reporter
pSF-CMV-Ub-RLuc AscI
pCMV-Green Renilla Luc
pGL4.38[luc2P p53 RE Hygro]
pMCS-Cypridina Luc
pSF-CMVe-FLuc
pCMV-Red Firefly Luc
pGL4.39[luc2P ATF6 RE Hygro]
pMCS-Gaussia Luc
pSF-CMVe-RLuc
pCRE-MetLuc2-Reporter
pGL4.40[luc2P MRE Hygro]
pMCS-Gaussia-Dura Luc
pSF-MinProm-FLuc
pFN26A (BIND) hRluc-neo Flexi Vector
pGL4.41[luc2P HSE Hygro]
pMCS-Green Renilla Luc
pSF-MinProm-RLuc
pGEM-luc
pGL4.42[luc2P HRE Hygro]
pMCS-Red Firefly Luc
pSF-pA-CMVe-FLuc
pGL2-Basic
pGL4.43[luc2P XRE Hygro]
pMetLuc-Mem Control
pSF-pA-CMVe-RLuc
pGL2-Control
pGL4.44[luc2P AP1 RE Hygro]
pMetLuc-Mem Reporter
pSF-pA-MinProm-FLuc
pGL2-Enhancer
pGL4.45[luc2P ISRE Hygro]
pMetLuc2-Control
pSF-pA-MinProm-RLuc
pGL2-Promoter
pGL4.47[luc2P SIE Hygro]
pMetLuc2-Reporter
pSF-pA-PromMCS-FLuc
pGL3-Basic
pGL4.48[luc2P SBE Hygro]
pmirGLO
pSF-pA-PromMCS-RLuc
pGL3-Control
pGL4.49[luc2P TCF-LEF RE Hygro]
pMirTarget
pSF-PromMCS-FLuc
pGL3-Enhancer
pGL4.50[luc2 CMV Hygro]
pNFkB-MetLuc2-Reporter
pSF-PromMCS-RLuc
pGL3-Promoter
pGL4.51[luc2 CMV Neo]
pNL1.1.CMV[Nluc CMV]
pSF-RecA-FLuc
pGL4.10[luc2]
pGL4.52[luc2P STAT5 RE Hygro]
pNL1.1[Nluc]
pSP-luc+NF
pGL4.11[luc2P]
pGL4.70[hRluc]
pNL1.2[NlucP]
pSV40-CLuc
pGL4.12[luc2CP]
pGL4.71[hRlucP]
pNL1.3.CMV[secNluc CMV]
pSV40-GLuc
pGL4.13[luc2 SV40]
pGL4.72[hRlucCP]
pNL1.3[secNluc]
pTK-CLuc
pGL4.14[luc2 Hygro]
pGL4.73[hRluc SV40]
pNL2.1[Nluc Hygro]
pTK-Cypridina Luc
pGL4.15[luc2P Hygro]
pGL4.74[hRluc TK]
pNL2.2[NlucP Hygro]
pTK-Gaussia Luc
pGL4.16[luc2CP Hygro]
pGL4.75[hRluc CMV]
pNL2.3[secNluc Hygro]
pTK-Gaussia-Dura Luc
pGL4.17[luc2 Neo]
pGL4.76[hRluc Hygro]
pNL3.1[Nluc minP]
pTK-GLuc
pGL4.18[luc2P Neo]
pGL4.77[hRlucP Hygro]
pNL3.2.NF-kB-RE[NlucP NF-kB-RE Hygro]
pTK-Green Renilla Luc
pGL4.19[luc2CP Neo]
pGL4.78[hRlucCP Hygro]
pNL3.2[NlucP minP]
pTK-Red Firefly Luc
pGL4.20[luc2 Puro]
pGL4.79[hRluc Neo]
pNL3.3[secNluc minP]
pXPG
pGL4.21[luc2P Puro]
pGL4.80[hRlucP Neo]
pRL-CMV

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